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Home: BIO 490

Intro to Scientific Literature
Database Searching
Databases by Topic

Citation Indexing

Effective Oral Presentations

Scientific Papers
 Parts of a Paper
 Evaluate a Paper
 Edit & Review a Paper

Style Guides &
Citation Formats

Ethics & Professionalism

Careers in Biology

 

BIO 490: Senior Seminar in Biological Sciences

Course Instructor: Blanche Haning
Librarian: Eleanor Smith

The Scientific Literature:
Research and Presentation Methods for BIO 490


About this page: This page is designed to support your research and projects in class. We hope you find it helpful. If you have suggestions for improving the page, or find a dead link, please contact your librarian: Eleanor Smith, or your professor. Even with all the resources available online, this page does not substitute for coming to the library!


Introduction to the Scientific Literature

The scientific literature is an integral part of the scientific research process. Biologists consult the literature when writing grants and planning experiments. They present their findings at conferences and publish them in established scholarly journals. Thus, learning how to locate, read, and evaluate the literature, especially journal articles, is an essential skill for scientists.

The scientific literature is often divided into two main categories, primary and secondary literature. Each type is useful at different stages of the research process.

Primary literature reports research findings directly. Journal articles are a major type of primary literature. Other types of primary literature include conference proceedings, technical reports, and theses and dissertations.

Secondary literature interprets, summarizes, or extracts information from the primary literature. Types of secondary literature are listed below:

Review articles, textbooks and other books, and encyclopedias usually provide a summary or overview of the primary literature on a specific subject. These sources are very useful to provide background information when beginning a new research area or reading an article in an unfamiliar area.

Handbooksand manuals pull together specific pieces of data and can be especially useful when a specific piece of information or a method is needed when planning, performing, or evaluating experiments.

Databases and indexes usually include citations and abstracts of the journal literature and help identify and provide access to literature on a specific topic or by particular authors.

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Using Databases to Find Articles: Planning and Implementing your Search

Searching 1: Getting Started

Planning your Search
Select a topic and identify the major concepts and ideas as well as appropriate terms and synonyms for each concept or idea. This will help you build your search in a database.

Selecting and Searching a Database
Databases are organized by subject area or discipline. Recommended databases are described in the database section below. Biological Abstracts is the major biology database and would be appropriate for most every topic. Additional databases that are more subject specific (e.g., health, environment, etc.) are also included in the table.

Searching 2: Evaluating and Modifying your Search

Begin the search with keywords, look at the results, and select subject terms or descriptors to make your search more specific. The table below includes other helpful search tips.

Search Tips for Databases on the NCSU WWW site

Example: The effects, actual or potential, of climate change on biodiversity

Comments: This might be a very broad search. Also consider that different terms than those given may be used. For example, climate change may also be referred to as global warming. Biodiversity can also be described in other terms, such as ecosystem diversity or species diversity.

Begin your Search
To search by
keyword
Type the words or phrases you wish to begin your search and press [Enter]
climate change[Enter]
Retrieves records with the phrase Climate change
Searching by author Authors are indexed by last name and first (and often middle) initial. For example, search for Charles Bright as Bright C, Bright C* or Bright*
Evaluate and Modify your Search
To truncate terms
(wildcard searching)
Type the word you wish to search followed by an asterisk (*)
pollut* [Enter]
Note: The truncation symbol varies
depending on the search software.
Retrieves records with terms beginning with pollut such as pollute, pollution, polluting.
AND narrows your search climate change AND biodiversity
[Enter]
Retrieves any record that contains all of the terms climate change and biodiversity. The terms, however, do not have to be adjacent to, or even near, one another.
OR broadens your search climate change OR global warming[Enter] Retrieves any record that contains either the term climate change or global warming.
Further Focus and Refine your Search
Set searching #1 and #2 [Enter]
Note: May not work in all databases. Does not work in WWW search engines.
Retrieves records that contain both a term from set #1 and a term from set #2. Set #1 might consist of global warming OR climate change and Set #2 could be diversity OR biodiversity OR extinction
Nesting (diversity OR biodiversity) and (climate change)[Enter]
Note: Used when set searching isn't available.
Retrieves records that contain either the terms diversity or biodiversity and the term climate change.
Vocabulary Many databases have a specific vocabulary, often included in an online thesaurus of terms. Individual database records may list these terms as descriptors. Explore the thesaurus in the database, or the subject terms in individual database records, to identify more specific or appropriate terms to use in your search.


This web page, http://www.lib.purdue.edu/life/searchtips.html, includes some other helpful search tips.

 If you need help with your searches: Ask a Librarian!

Searching 3: Finding the Article in the Library

Search the online catalog to see if NCSU Libraries has the journal:
go to the detailed search page in the online catalog. (If you are at the library home page, click on "search options".)

  • First, select Journal Title as the "Search Type" from the pull-down menu.
  • Then type in the complete title of the journal-- Example: scientific american (omit any beginning articles, such as "the"). Note: the catalog does not search by abbreviations for journal names.
  • Finally, click on the Search button.

Look at the catalog record to locate the journal in the library.

  • All journals are organized by call number.
  • Current journals are located in the Periodical Reading Room, and older journals are located in the book stack towers (where books are located).
  • If the journal is available electronically, the catalog record will have a link to the journal.

If the NCSU Libraries does not have the book or journal that you need:

  • Use the TripSaver/Interlibrary Loan service to obtain books and articles from other universities.
  • This service is free to NCSU students, staff, and faculty.
  • If Duke, UNC-Chapel Hill, or NCCU has the journal, the article usually arrives within 2-4 business days.
  • Forms are available online.

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Databases and Websites by Topic

Use the Database Finder!

The Database Finder on the library's web site organizes databases by subject area.  Use the drop-down menu to select a subject area and hit "Go."  

The resulting list has three categories of databases.  Core, or major, databases for a subject area are at the top.  Narrower, or more specialized, databases are in the second section.  Databases, usually multidisciplinary ones, that have some coverage of a topic are listed in the last section.

Biological Abstracts Database

Note: This is the primary database in the Biological Sciences.
It covers all areas and is a very good place to begin searching
for articles on any of your topics.

Biological Abstracts
The most comprehensive biological database, scans over 4,000 journals and is international in scope. Covers all subjects in biology, biomedicine, and the life sciences, including agriculture, biochemistry, biotechnology, ecology, immunology, microbiology, neuroscience, pharmacology, public health, and toxicology. Includes original research articles (not reviews or conferences, these are included in the Biological Abstracts/RRM database).
Coverage: 1969-present. (Most records included in the database from 1985 contain abstracts.)

Databases & Websites to Search for Articles in Agriculture

Biological Abstracts (see description, above)

Agricola
Covers the world's agricultural literature, including plant and animal sciences, forestry, soil and water resources, and earth and environmental sciences. Records describe journal articles, book chapters, books, series, microforms, audiovisuals, maps, and other types of material. Coverage: 1970-current (with some older material back to the 16th century).

CAB Abstracts
Covers the world's literature on agriculture, forestry, and allied disciplines, including animal and crop husbandry, animal and plant breeding, plant protection, genetics, forestry engineering, economics, veterinary medicine, human nutrition, recreation, and rural development. Records describe journal articles, books, conference papers, reports, and other types of material. Coverage: 1972-current.

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Databases & Websites to Search for Articles on Environmental Topics

Environmental Sciences & Pollution Management
This multidisciplinary database provides comprehensive coverage of the environmental sciences. Abstracts and citations are drawn from over 1500 scientific journals and thousands of other sources including conference proceedings, reports, monographs, books and government publications. This is a collection of databases that includes Ecology Abstracts, Pollution Abstracts, Water Resources Abstracts, and several others. You can also search the databases in this collection individually.   Coverage: 1981-current.
Note:  When you get to the Cambridge Scientific Abstracts database page, put a check mark in the box next to the database(s) that you want to search.

Biological Abstracts(see description, above)

Databases & Websites to Search for Articles in Medical & Health Sciences

Medline via PubMed
Covers over 3900 current biomedical journals in the fields of medicine, nursing, dentistry, veterinary medicine, the health care system, bioethics, and the preclinical sciences, including molecular biology and genetics. Includes abstracts and citations, and links to the full-text of articles in journals to which NC State subscribes. PubMed also links to the National Center for
Biotechnology Information's molecular biology databases.
Coverage: 1966- . Updated weekly.
Medline is also available through Cambridge Scientific Abstracts.

HealthSource Plus
Indexing and abstracts for 500 consumer health, nutrition and professional periodicals. Includes many complete articles (full-text) from 250 periodicals, 19 books, and 1000 pamphlets. NOTE: Includes both scientific research articles as well as articles from the popular press.
Coverage: Indexing, 1984-; Full Text, 1990-.

CINAHL
This database covers nursing, biomedicine, health sciences librarianship, consumer health, and 17 allied health disciplines, and contains indexing for over 1,200 nursing for journals, books and book chapters, dissertations, selected conference proceedings, standards of practice, pamphlets, educational software packages and audiovisual material.
Coverage: 1982- .

Biological Abstracts (see description, above)

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Databases & Websites to Search for Articles on Genetics and Biotechnology

Genetics Abstracts
Genetics Abstracts emphasizes the field of molecular genetics, with important information on all aspects of DNA, differentiation and development, RNA, protein synthesis, ribosomes, nuclear proteins and chromatin, enzymes, and gene regulation. Coverage: 1982-present.

Nucleic Acids Abstracts
Covers innovative cloning and sequencing strategies as well as gene regulatory sequences and proteins, RNA processing and transport, RNA editing, DNA biosynthesis, transcription factors, and oncoproteins. Coverage: 1982-present.

Medical & Pharmaceutical Biotechnology Abstracts
Covers the worldwide literature on topics where genetics, molecular biology, or biotechnology are applied to human medicine, human health, or pharmaceutical development. Coverage: 1993-present.

Special Search Tip: The above three databases, Genetics Abstracts, Nucleic Acids Abstracts, and Medical & Pharmaceutical Biotechnology Abstracts are all part of Cambridge Scientific Abstracts. You can search them simultaneously by going to the CSA Database page and selecting the individual databases from the database list.

Medline via PubMed
Described in the previous section. Covers the medical sciences, and pre-clinical sciences such as biochemistry, genetics, and molecular biology. Also links to National Center for Biotechnology Information's molecular biology databases.

Biological Abstracts(see description, above)

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History of Science

History of Science, Technology and Medicine
Covers the history of science, technology, and medicine and allied historical fields. Contains records describing journal articles, conference proceedings, books, book reviews, and dissertations. Coverage: 1975-present.
For earlier coverage in the history of science, consult the ISIS Cumulative Bibliography in the Reference Stacks (D.H. Hill Ref. Q125 .I85). This is a print index that goes back to 1913.

The databases below are more general history and humanities databases, but they may contain some relevant citations:

America: History and Life
Covers United States and Canadian history from prehistory to the present. Scope: current affairs, area studies, archaeology, ethnic studies, folklore, historiography and methodology, international relations, oral history, government and political science, popular culture, urban affairs, teaching of history, and other interdisciplinary studies of historical interest and history-related topics in the social sciences and humanities. Coverage: 1964-present.

Arts and Humanities Citation Index
Multidisciplinary index to the journal literature of the arts and humanities. Covers over 1100 journals spanning 25 disciplines. Can view article bibliographies and search cited references and authors. Coverage: 1975-present.
Note: Consider also searching the Science Citation Index (Web of Science), a multidisciplinary science index, focus is more on scientific research than history of science.

Historical Abstracts
Index to scholarly journal articles in history journals covering the time period 1450 to the present, and focusing on regions outside the U.S. and Canada. Coverage: 1969-present.

Internet History of Science Sourcebook
http://www.fordham.edu/halsall/science/sciencesbook.html
Extensive web site of history of science information, including some original documents. Probably best for background information.

Philosopher's Index
Includes indexing and abstracts from books and journals of philosophy and related fields. It covers the areas of ethics, aesthetics, social philosophy, political philosophy, epistemology, and metaphysic logic as well as material on the philosophy of law, religion, science, history, education, and language. Coverage: 1949-present.

Finding Biographical Information about Scientists

TIP: Don't forget to search the library catalog for books about a specific scientist. Change the pull-down menu to "subject" and enter the scientist's name, last name first.

Dictionary of Scientific Biography
DH Hill Ref. Q141 .D5 1981 (18 vols.)
Substantial biographical essays about major scientists from the Ancient Greece through the twentieth century. Includes bibliographies of works by and about the scientists.

Biography and Genealogy Master Index Online
Biography and Genealogy Master Index is a comprehensive index to more than 12.7 million biographical sketches in more than 3,400 volumes and editions of current and retrospective reference books, covering both contemporary and historical figures throughout the world. It includes references to the "Who's Who in...." series.

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